Package: hhh4contacts 0.13.4.9000

Sebastian Meyer

hhh4contacts: Age-Structured Spatio-Temporal Models for Infectious Disease Counts

Meyer and Held (2017) <doi:10.1093/biostatistics/kxw051> present an age-structured spatio-temporal model for infectious disease counts. The approach is illustrated in a case study on norovirus gastroenteritis in Berlin, 2011-2015, by age group, city district and week, using additional contact data from the POLYMOD survey. This package contains the data and code to reproduce the results from the paper, see 'demo("hhh4contacts")'.

Authors:Sebastian Meyer [aut, cre], Leonhard Held [ctb, ths]

hhh4contacts_0.13.4.9000.tar.gz
hhh4contacts_0.13.4.9000.zip(r-4.7-any)hhh4contacts_0.13.4.9000.zip(r-4.6-any)hhh4contacts_0.13.4.9000.zip(r-4.5-any)
hhh4contacts_0.13.4.9000.tgz(r-4.6-any)hhh4contacts_0.13.4.9000.tgz(r-4.5-any)
hhh4contacts_0.13.4.9000.tar.gz(r-4.7-any)hhh4contacts_0.13.4.9000.tar.gz(r-4.6-any)
hhh4contacts_0.13.4.9000.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION |NEWS
card.svg |card.png
hhh4contacts/json (API)

# Install 'hhh4contacts' in R:
install.packages('hhh4contacts', repos = c('https://ee-lib.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://codeberg.org/ee-hub/hhh4contacts

Datasets:

On CRAN:

Conda:

3.38 score 29 scripts 1.7k downloads 1 mentions 18 exports 13 dependencies

Last updated from:6789d6251a. Checks:9 OK. Indexed: no.

TargetResultTimeFilesSyslog
linux-develOK147
source / vignettesOK143
linux-releaseOK112
macos-releaseOK94
macos-oldrelOK121
windows-develOK96
windows-releaseOK85
windows-oldrelOK99
wasm-releaseOK82

Exports:adaptPaddGroups2WFUNaggregateCaggregateCountsArrayC2popcontactmatrixdssAggregateexpandCfitCmake_powerCnoroBEplotCplotHHH4_fitted_groupsplotHHH4_maps_groupsplotHHH4_season_groupsstationarystratumstsplothook_highlight

Dependencies:deldirlatticeMASSMatrixnlmepolyclippolyCubspspatstat.dataspatstat.geomspatstat.univarspatstat.utilssurveillance