Package: hhh4contacts 0.13.4

Sebastian Meyer

hhh4contacts: Age-Structured Spatio-Temporal Models for Infectious Disease Counts

Meyer and Held (2017) <doi:10.1093/biostatistics/kxw051> present an age-structured spatio-temporal model for infectious disease counts. The approach is illustrated in a case study on norovirus gastroenteritis in Berlin, 2011-2015, by age group, city district and week, using additional contact data from the POLYMOD survey. This package contains the data and code to reproduce the results from the paper, see 'demo("hhh4contacts")'.

Authors:Sebastian Meyer [aut, cre], Leonhard Held [ctb, ths]

hhh4contacts_0.13.4.tar.gz
hhh4contacts_0.13.4.zip(r-4.7)hhh4contacts_0.13.4.zip(r-4.6)hhh4contacts_0.13.4.zip(r-4.5)
hhh4contacts_0.13.4.tgz(r-4.6-any)hhh4contacts_0.13.4.tgz(r-4.5-any)
hhh4contacts_0.13.4.tar.gz(r-4.7-any)hhh4contacts_0.13.4.tar.gz(r-4.6-any)
hhh4contacts_0.13.4.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION |NEWS
card.svg |card.png
hhh4contacts/json (API)

# Install 'hhh4contacts' in R:
install.packages('hhh4contacts', repos = c('https://ee-lib.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://codeberg.org/ee-hub/hhh4contacts

Datasets:

On CRAN:

Conda:

3.11 score 26 scripts 382 downloads 1 mentions 18 exports 14 dependencies

Last updated from:3eb3f608e0. Checks:9 OK. Indexed: no.

TargetResultTimeFilesSyslog
linux-devel-x86_64OK140
source / vignettesOK233
linux-release-x86_64OK128
macos-release-arm64OK99
macos-oldrel-arm64OK91
windows-develOK99
windows-releaseOK104
windows-oldrelOK105
wasm-releaseOK96

Exports:adaptPaddGroups2WFUNaggregateCaggregateCountsArrayC2popcontactmatrixdssAggregateexpandCfitCmake_powerCnoroBEplotCplotHHH4_fitted_groupsplotHHH4_maps_groupsplotHHH4_season_groupsstationarystratumstsplothook_highlight

Dependencies:deldirlatticeMASSMatrixnlmepolyclippolyCubspspatstat.dataspatstat.geomspatstat.univarspatstat.utilssurveillancextable